Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 ALG1L8P-201ENST00000533887 760 ntBASIC17.77■□□□□ 0.44
BEST2Q8NFU1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 AC106028.4-201ENST00000614509 607 ntBASIC17.77■□□□□ 0.44
BEST2Q8NFU1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 PCGF3-213ENST00000620529 1899 ntBASIC17.77■□□□□ 0.43
BEST2Q8NFU1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 GGT3P-204ENST00000453783 1664 ntBASIC17.77■□□□□ 0.43
BEST2Q8NFU1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.77■□□□□ 0.43
BEST2Q8NFU1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 AL512356.2-201ENST00000546955 174 ntBASIC17.76■□□□□ 0.43
BEST2Q8NFU1 AC026150.2-201ENST00000564693 1156 ntBASIC17.76■□□□□ 0.43
BEST2Q8NFU1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BEST2Q8NFU1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 SPDYE14P-201ENST00000442619 822 ntBASIC17.75■□□□□ 0.43
BEST2Q8NFU1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 SPTSSB-204ENST00000617024 1292 ntBASIC17.75■□□□□ 0.43
BEST2Q8NFU1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 AD000864.1-201ENST00000624076 2295 ntBASIC17.75■□□□□ 0.43
BEST2Q8NFU1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST2Q8NFU1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms