Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HYMAI-201ENST00000635591 3347 ntBASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 AL353732.1-201ENST00000569618 1459 ntBASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 AL512652.2-201ENST00000625156 1716 ntBASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 CYP2A7P1-201ENST00000595391 815 ntBASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 AC026691.1-201ENST00000602502 2017 ntBASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIMC1Q8NDZ2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 AC091167.2-201ENST00000579581 588 ntBASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 AC140113.2-201ENST00000604370 208 ntBASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIMC1Q8NDZ2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 AL513480.1-201ENST00000451731 511 ntBASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 AP002490.2-201ENST00000524791 560 ntBASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms