Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RTL3Q8N8U3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTL3Q8N8U3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTL3Q8N8U3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTL3Q8N8U3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RTL3Q8N8U3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.96■□□□□ 0.3
RTL3Q8N8U3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
RTL3Q8N8U3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RTL3Q8N8U3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 SPDYE11-202ENST00000450699 704 ntBASIC16.95■□□□□ 0.3
RTL3Q8N8U3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 POU5F1P6-201ENST00000466990 990 ntBASIC16.95■□□□□ 0.3
RTL3Q8N8U3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 KRT8P48-201ENST00000515599 1220 ntBASIC16.95■□□□□ 0.3
RTL3Q8N8U3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 SPDYE9P-201ENST00000570642 692 ntBASIC16.95■□□□□ 0.3
RTL3Q8N8U3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 SPDYE10P-202ENST00000612005 668 ntBASIC16.95■□□□□ 0.3
RTL3Q8N8U3 SPDYE8P-202ENST00000612377 668 ntBASIC16.95■□□□□ 0.3
RTL3Q8N8U3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 CROCCP1-201ENST00000426910 5675 ntBASIC16.95■□□□□ 0.3
RTL3Q8N8U3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL3Q8N8U3 AL118508.1-201ENST00000613502 2345 ntBASIC16.95■□□□□ 0.3
RTL3Q8N8U3 AC073439.1-201ENST00000624121 1774 ntBASIC16.94■□□□□ 0.3
RTL3Q8N8U3 AC099398.1-201ENST00000567919 2776 ntBASIC16.94■□□□□ 0.3
RTL3Q8N8U3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 TIMM8BP1-201ENST00000452384 211 ntBASIC16.94■□□□□ 0.3
RTL3Q8N8U3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.94■□□□□ 0.3
RTL3Q8N8U3 AC243562.1-201ENST00000560672 389 ntBASIC16.94■□□□□ 0.3
RTL3Q8N8U3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms