Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 GPX1P2-201ENST00000429271 606 ntBASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 HLA-J-202ENST00000469281 1241 ntBASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC82Q8N4S0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 AC002056.1-201ENST00000395613 760 ntBASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 UPF3AP3-201ENST00000420996 769 ntBASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 AC112191.1-201ENST00000523689 701 ntBASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 AC005829.1-201ENST00000570002 483 ntBASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 AC016027.1-202ENST00000607927 1699 ntBASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC82Q8N4S0 PCDHB19P-201ENST00000570871 2371 ntBASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 GPAA1P2-202ENST00000606848 1787 ntBASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 KRT18P13-201ENST00000400056 1290 ntBASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 DNAJB3-201ENST00000446806 729 ntBASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 MIR3687-2-201ENST00000577708 61 ntBASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 MIR3687-1-201ENST00000614492 61 ntBASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 AC023511.2-201ENST00000618803 211 ntBASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 AC055717.3-201ENST00000622967 595 ntBASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC82Q8N4S0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC82Q8N4S0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms