Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 KRT18P1-202ENST00000452408 1331 ntBASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.52■□□□□ 0.24
NUDCD3Q8IVD9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.52■□□□□ 0.23
NUDCD3Q8IVD9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 AC023824.1-201ENST00000562945 2975 ntBASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 NSUN5P1-202ENST00000421140 1535 ntBASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 NSUN5P2-203ENST00000457352 1529 ntBASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 AP005117.1-202ENST00000581724 1908 ntBASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 KRT17P6-201ENST00000453795 1220 ntBASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 AL353135.1-201ENST00000606729 504 ntBASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 KRT8P39-201ENST00000396270 1433 ntBASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 MST1L-201ENST00000442552 2185 ntBASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NUDCD3Q8IVD9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 AC073592.4-201ENST00000623827 446 ntBASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 AL590326.2-201ENST00000625139 305 ntBASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
NUDCD3Q8IVD9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms