Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 GPAA1P2-202ENST00000606848 1787 ntBASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 AC073347.1-201ENST00000421633 2643 ntBASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 AP002383.4-201ENST00000442518 975 ntBASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 TOB2P1-201ENST00000469761 992 ntBASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LRRTM1Q86UE6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 AC013268.4-201ENST00000637413 2228 ntBASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 POM121L3P-201ENST00000419331 1163 ntBASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 TSSC2-201ENST00000450217 709 ntBASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 PAWRP1-201ENST00000451083 565 ntBASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 PRYP5-201ENST00000451909 266 ntBASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 AC010654.1-201ENST00000615722 808 ntBASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 AC066615.1-201ENST00000640911 628 ntBASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRRTM1Q86UE6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 AC005332.1-201ENST00000577698 1310 ntBASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 AC069224.1-201ENST00000566372 1715 ntBASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRTM1Q86UE6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms