Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 AC027369.6-201ENST00000525520 931 ntBASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 AC080080.1-201ENST00000625121 2420 ntBASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 UBALD1-205ENST00000590891 2641 ntBASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC27A1Q6PCB7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 LINC02084-201ENST00000606069 1096 ntBASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 SPDYE12P-201ENST00000618416 771 ntBASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC27A1Q6PCB7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC27A1Q6PCB7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC27A1Q6PCB7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
SLC27A1Q6PCB7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC27A1Q6PCB7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC27A1Q6PCB7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC27A1Q6PCB7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms