Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SWSAP1Q6NVH7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 HLA-H-201ENST00000383620 1096 ntBASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 AC055876.3-201ENST00000431496 288 ntBASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 AC140878.1-201ENST00000565277 250 ntBASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 AC138649.4-201ENST00000612222 287 ntBASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SWSAP1Q6NVH7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 PCGF3-213ENST00000620529 1899 ntBASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 OR6D1P-203ENST00000641209 4860 ntBASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 FO538757.1-201ENST00000623083 1397 ntBASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SWSAP1Q6NVH7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 FAM220BP-201ENST00000377689 816 ntBASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 TREML5P-201ENST00000421694 576 ntBASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 AC011467.4-201ENST00000594891 528 ntBASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SWSAP1Q6NVH7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms