Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPP4R3AQ6IN85 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPP4R3AQ6IN85 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PPP4R3AQ6IN85 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.81■□□□□ 0.6
PPP4R3AQ6IN85 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
PPP4R3AQ6IN85 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PPP4R3AQ6IN85 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP4R3AQ6IN85 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 KRT18P34-201ENST00000488218 1270 ntBASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 PCGF3-213ENST00000620529 1899 ntBASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PPP4R3AQ6IN85 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 LINC01144-201ENST00000626198 1710 ntBASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 PCDHA14-201ENST00000506751 2298 ntBASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 KRT18P13-201ENST00000400056 1290 ntBASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 TFAMP1-201ENST00000412727 736 ntBASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 MIR4469-201ENST00000583919 79 ntBASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.78■□□□□ 0.6
PPP4R3AQ6IN85 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms