Protein–RNA interactions for Protein: Q68G74

LHX8, LIM/homeobox protein Lhx8, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX8Q68G74 AC020765.3-201ENST00000613051 740 ntBASIC18.12■□□□□ 0.49
LHX8Q68G74 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.12■□□□□ 0.49
LHX8Q68G74 AL139011.1-202ENST00000642063 584 ntBASIC18.12■□□□□ 0.49
LHX8Q68G74 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.12■□□□□ 0.49
LHX8Q68G74 AC087289.5-201ENST00000586076 3175 ntBASIC18.12■□□□□ 0.49
LHX8Q68G74 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LHX8Q68G74 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX8Q68G74 PCDHB17P-201ENST00000539533 2393 ntBASIC18.12■□□□□ 0.49
LHX8Q68G74 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX8Q68G74 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX8Q68G74 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX8Q68G74 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LHX8Q68G74 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX8Q68G74 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LHX8Q68G74 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LHX8Q68G74 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LHX8Q68G74 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LHX8Q68G74 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LHX8Q68G74 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.11■□□□□ 0.49
LHX8Q68G74 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LHX8Q68G74 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LHX8Q68G74 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.11■□□□□ 0.49
LHX8Q68G74 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.11■□□□□ 0.49
LHX8Q68G74 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC18.11■□□□□ 0.49
LHX8Q68G74 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.11■□□□□ 0.49
LHX8Q68G74 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.11■□□□□ 0.49
LHX8Q68G74 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.11■□□□□ 0.49
LHX8Q68G74 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LHX8Q68G74 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.11■□□□□ 0.49
LHX8Q68G74 MIR5189-201ENST00000577370 114 ntBASIC18.11■□□□□ 0.49
LHX8Q68G74 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LHX8Q68G74 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 AL445523.1-201ENST00000451184 1362 ntBASIC18.11■□□□□ 0.49
LHX8Q68G74 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LHX8Q68G74 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LHX8Q68G74 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.11■□□□□ 0.49
LHX8Q68G74 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LHX8Q68G74 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX8Q68G74 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX8Q68G74 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX8Q68G74 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX8Q68G74 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LHX8Q68G74 KRT8P22-201ENST00000562317 1415 ntBASIC18.1■□□□□ 0.49
LHX8Q68G74 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
LHX8Q68G74 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LHX8Q68G74 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.1■□□□□ 0.49
LHX8Q68G74 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.1■□□□□ 0.49
LHX8Q68G74 AC108725.1-201ENST00000495472 409 ntBASIC18.1■□□□□ 0.49
LHX8Q68G74 AC093801.2-201ENST00000503966 1050 ntBASIC18.1■□□□□ 0.49
LHX8Q68G74 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.1■□□□□ 0.49
LHX8Q68G74 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.1■□□□□ 0.49
LHX8Q68G74 AC103810.3-201ENST00000583567 96 ntBASIC18.1■□□□□ 0.49
LHX8Q68G74 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX8Q68G74 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.1■□□□□ 0.49
LHX8Q68G74 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LHX8Q68G74 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LHX8Q68G74 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX8Q68G74 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX8Q68G74 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LHX8Q68G74 AC092068.3-201ENST00000587894 2016 ntBASIC18.1■□□□□ 0.49
LHX8Q68G74 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
LHX8Q68G74 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LHX8Q68G74 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX8Q68G74 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX8Q68G74 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LHX8Q68G74 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.09■□□□□ 0.49
LHX8Q68G74 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
LHX8Q68G74 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.09■□□□□ 0.49
LHX8Q68G74 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LHX8Q68G74 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.09■□□□□ 0.49
LHX8Q68G74 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LHX8Q68G74 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.09■□□□□ 0.49
LHX8Q68G74 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms