Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 HAUS4P1-201ENST00000406739 1145 ntBASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AC068587.3-201ENST00000526613 355 ntBASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VPS13DQ5THJ4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 KRT8P44-201ENST00000441609 1350 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 NME6-203ENST00000415644 849 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AC007969.1-201ENST00000433675 447 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AL139010.1-201ENST00000454878 894 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AC108725.1-201ENST00000495472 409 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AP001889.1-201ENST00000525414 633 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 MSTO2P-201ENST00000314835 1709 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 CLK3P2-201ENST00000427566 1453 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AL592424.1-201ENST00000563624 1536 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 ABBA01031660.1-201ENST00000635219 756 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 AL133373.2-201ENST00000623187 2828 ntBASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC10.91□□□□□ -0.66
VPS13DQ5THJ4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms