Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 AC012441.1-201ENST00000446669 685 ntBASIC14.15□□□□□ -0.14
LRRK2Q5S007 FTLP10-202ENST00000505798 471 ntBASIC14.15□□□□□ -0.14
LRRK2Q5S007 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 AC120045.2-201ENST00000567334 178 ntBASIC14.15□□□□□ -0.14
LRRK2Q5S007 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRK2Q5S007 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRK2Q5S007 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 AC073130.3-201ENST00000624389 2278 ntBASIC14.14□□□□□ -0.15
LRRK2Q5S007 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 RPL13AP25-201ENST00000484130 612 ntBASIC14.14□□□□□ -0.15
LRRK2Q5S007 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 MTX1P1-201ENST00000440904 838 ntBASIC14.14□□□□□ -0.15
LRRK2Q5S007 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRK2Q5S007 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRK2Q5S007 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 AL627389.1-201ENST00000413508 1182 ntBASIC14.13□□□□□ -0.15
LRRK2Q5S007 SOCS2P1-201ENST00000417727 557 ntBASIC14.13□□□□□ -0.15
LRRK2Q5S007 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 HIST3H2BA-201ENST00000436555 524 ntBASIC14.13□□□□□ -0.15
LRRK2Q5S007 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 CASP16P-204ENST00000635032 809 ntBASIC14.13□□□□□ -0.15
LRRK2Q5S007 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms