Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 AL031432.2-201ENST00000566714 459 ntBASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 AL928711.1-201ENST00000570165 459 ntBASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 AL645728.2-201ENST00000641974 660 ntBASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 AL031731.1-201ENST00000642131 2094 ntBASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.51■□□□□ 0.55
HERC4Q5GLZ8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 AL662844.4-201ENST00000606367 2838 ntBASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 TSEN15P1-201ENST00000423257 515 ntBASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 AC190387.1-201ENST00000551683 408 ntBASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 AC018845.2-201ENST00000568326 409 ntBASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 AC023141.13-201ENST00000604991 943 ntBASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 AL078644.1-201ENST00000609881 752 ntBASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 AC007064.4-201ENST00000637740 555 ntBASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HERC4Q5GLZ8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HERC4Q5GLZ8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms