Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDH17Q12864 PMS2P4-201ENST00000412466 1052 ntBASIC16.75■□□□□ 0.27
CDH17Q12864 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CDH17Q12864 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH17Q12864 AL031055.1-201ENST00000606362 631 ntBASIC16.75■□□□□ 0.27
CDH17Q12864 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDH17Q12864 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CDH17Q12864 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDH17Q12864 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH17Q12864 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 AC006449.6-201ENST00000612330 2296 ntBASIC16.75■□□□□ 0.27
CDH17Q12864 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH17Q12864 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDH17Q12864 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH17Q12864 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH17Q12864 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH17Q12864 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH17Q12864 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH17Q12864 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH17Q12864 AC079776.4-201ENST00000511039 504 ntBASIC16.74■□□□□ 0.27
CDH17Q12864 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 AC096734.2-201ENST00000562054 433 ntBASIC16.74■□□□□ 0.27
CDH17Q12864 Z83851.2-201ENST00000609564 659 ntBASIC16.74■□□□□ 0.27
CDH17Q12864 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 AL596087.1-201ENST00000400979 1969 ntBASIC16.74■□□□□ 0.27
CDH17Q12864 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH17Q12864 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.74■□□□□ 0.27
CDH17Q12864 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH17Q12864 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDH17Q12864 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH17Q12864 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH17Q12864 PCDHA1-201ENST00000378133 2726 ntBASIC16.74■□□□□ 0.27
CDH17Q12864 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH17Q12864 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH17Q12864 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH17Q12864 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CDH17Q12864 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH17Q12864 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH17Q12864 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH17Q12864 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH17Q12864 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH17Q12864 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH17Q12864 RHOQP3-201ENST00000437982 621 ntBASIC16.73■□□□□ 0.27
CDH17Q12864 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH17Q12864 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH17Q12864 AC010507.1-201ENST00000633895 436 ntBASIC16.73■□□□□ 0.27
CDH17Q12864 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH17Q12864 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH17Q12864 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH17Q12864 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms