Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SKOR1P84550 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SKOR1P84550 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.45■□□□□ 0.38
SKOR1P84550 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 SLC25A1P1-201ENST00000528351 927 ntBASIC17.45■□□□□ 0.38
SKOR1P84550 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.45■□□□□ 0.38
SKOR1P84550 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.45■□□□□ 0.38
SKOR1P84550 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.45■□□□□ 0.38
SKOR1P84550 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SKOR1P84550 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.45■□□□□ 0.38
SKOR1P84550 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 AL589182.2-201ENST00000619332 1049 ntBASIC17.45■□□□□ 0.38
SKOR1P84550 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SKOR1P84550 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SKOR1P84550 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.45■□□□□ 0.38
SKOR1P84550 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SKOR1P84550 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SKOR1P84550 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 FAM45BP-202ENST00000592932 1624 ntBASIC17.44■□□□□ 0.38
SKOR1P84550 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SKOR1P84550 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.44■□□□□ 0.38
SKOR1P84550 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.44■□□□□ 0.38
SKOR1P84550 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.44■□□□□ 0.38
SKOR1P84550 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SKOR1P84550 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 AC006058.4-201ENST00000624016 1670 ntBASIC17.44■□□□□ 0.38
SKOR1P84550 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SKOR1P84550 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.44■□□□□ 0.38
SKOR1P84550 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SKOR1P84550 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.43■□□□□ 0.38
SKOR1P84550 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SKOR1P84550 TSPY26P-202ENST00000565928 3884 ntBASIC17.43■□□□□ 0.38
SKOR1P84550 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SKOR1P84550 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.43■□□□□ 0.38
SKOR1P84550 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.43■□□□□ 0.38
SKOR1P84550 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 KRT18P67-201ENST00000432816 1264 ntBASIC17.43■□□□□ 0.38
SKOR1P84550 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.43■□□□□ 0.38
SKOR1P84550 FAM197Y8-203ENST00000450145 560 ntBASIC17.43■□□□□ 0.38
SKOR1P84550 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.43■□□□□ 0.38
SKOR1P84550 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.43■□□□□ 0.38
SKOR1P84550 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.43■□□□□ 0.38
SKOR1P84550 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 AL391256.1-201ENST00000443260 1855 ntBASIC17.43■□□□□ 0.38
SKOR1P84550 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SKOR1P84550 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.43■□□□□ 0.38
SKOR1P84550 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms