Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTRA4P83105 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.37■□□□□ 0.37
HTRA4P83105 AC018665.1-201ENST00000622927 1362 ntBASIC17.37■□□□□ 0.37
HTRA4P83105 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTRA4P83105 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTRA4P83105 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.37■□□□□ 0.37
HTRA4P83105 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.37■□□□□ 0.37
HTRA4P83105 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTRA4P83105 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTRA4P83105 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
HTRA4P83105 AL133338.1-201ENST00000565695 1517 ntBASIC17.37■□□□□ 0.37
HTRA4P83105 CYP4F24P-201ENST00000586049 1580 ntBASIC17.36■□□□□ 0.37
HTRA4P83105 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.36■□□□□ 0.37
HTRA4P83105 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 AL136982.4-201ENST00000437689 1740 ntBASIC17.36■□□□□ 0.37
HTRA4P83105 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.36■□□□□ 0.37
HTRA4P83105 AC067852.2-201ENST00000590513 2313 ntBASIC17.36■□□□□ 0.37
HTRA4P83105 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.36■□□□□ 0.37
HTRA4P83105 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.36■□□□□ 0.37
HTRA4P83105 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HTRA4P83105 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HTRA4P83105 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.36■□□□□ 0.37
HTRA4P83105 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.36■□□□□ 0.37
HTRA4P83105 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.36■□□□□ 0.37
HTRA4P83105 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HTRA4P83105 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HTRA4P83105 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 AC084346.2-201ENST00000607097 949 ntBASIC17.36■□□□□ 0.37
HTRA4P83105 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HTRA4P83105 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTRA4P83105 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
HTRA4P83105 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.35■□□□□ 0.37
HTRA4P83105 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HTRA4P83105 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.35■□□□□ 0.37
HTRA4P83105 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HTRA4P83105 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 MIR1908-201ENST00000410394 80 ntBASIC17.35■□□□□ 0.37
HTRA4P83105 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HTRA4P83105 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 SLC25A47P1-201ENST00000531577 414 ntBASIC17.35■□□□□ 0.37
HTRA4P83105 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.35■□□□□ 0.37
HTRA4P83105 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.35■□□□□ 0.37
HTRA4P83105 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.35■□□□□ 0.37
HTRA4P83105 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.35■□□□□ 0.37
HTRA4P83105 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HTRA4P83105 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 PDIA3P1-201ENST00000471856 1510 ntBASIC17.35■□□□□ 0.37
HTRA4P83105 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.35■□□□□ 0.37
HTRA4P83105 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HTRA4P83105 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA4P83105 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.35■□□□□ 0.37
HTRA4P83105 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HTRA4P83105 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA4P83105 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA4P83105 AL442647.2-201ENST00000429864 857 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms