Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CLDN20P56880 KRT19P2-202ENST00000557173 1012 ntBASIC15.23■□□□□ 0.03
CLDN20P56880 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLDN20P56880 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN20P56880 AC023141.13-201ENST00000604991 943 ntBASIC15.23■□□□□ 0.03
CLDN20P56880 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
CLDN20P56880 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CLDN20P56880 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLDN20P56880 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN20P56880 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN20P56880 AC024909.3-201ENST00000611513 2257 ntBASIC15.23■□□□□ 0.03
CLDN20P56880 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN20P56880 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN20P56880 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CLDN20P56880 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CLDN20P56880 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLDN20P56880 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN20P56880 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 YBX2P1-201ENST00000394192 760 ntBASIC15.22■□□□□ 0.03
CLDN20P56880 AC004832.2-201ENST00000426397 482 ntBASIC15.22■□□□□ 0.03
CLDN20P56880 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN20P56880 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN20P56880 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN20P56880 AC007064.4-201ENST00000637740 555 ntBASIC15.22■□□□□ 0.03
CLDN20P56880 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN20P56880 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 TOP3BP1-201ENST00000420768 1380 ntBASIC15.22■□□□□ 0.03
CLDN20P56880 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLDN20P56880 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.22■□□□□ 0.03
CLDN20P56880 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CLDN20P56880 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN20P56880 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN20P56880 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN20P56880 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLDN20P56880 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN20P56880 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN20P56880 KRT18P13-201ENST00000400056 1290 ntBASIC15.21■□□□□ 0.03
CLDN20P56880 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN20P56880 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN20P56880 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN20P56880 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.21■□□□□ 0.03
CLDN20P56880 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.21■□□□□ 0.03
CLDN20P56880 PDPK2P-202ENST00000562415 1191 ntBASIC15.21■□□□□ 0.03
CLDN20P56880 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms