Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.97□□□□□ -0.01
SUMO3P55854 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
SUMO3P55854 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
SUMO3P55854 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.97□□□□□ -0.01
SUMO3P55854 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.97□□□□□ -0.01
SUMO3P55854 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.97□□□□□ -0.01
SUMO3P55854 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SUMO3P55854 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.97□□□□□ -0.01
SUMO3P55854 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SUMO3P55854 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.96□□□□□ -0.01
SUMO3P55854 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.96□□□□□ -0.01
SUMO3P55854 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.96□□□□□ -0.01
SUMO3P55854 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.96□□□□□ -0.01
SUMO3P55854 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.96□□□□□ -0.01
SUMO3P55854 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
SUMO3P55854 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.96□□□□□ -0.01
SUMO3P55854 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.96□□□□□ -0.01
SUMO3P55854 GPX1P2-201ENST00000429271 606 ntBASIC14.96□□□□□ -0.01
SUMO3P55854 SPDYE11-202ENST00000450699 704 ntBASIC14.96□□□□□ -0.01
SUMO3P55854 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.96□□□□□ -0.01
SUMO3P55854 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.96□□□□□ -0.01
SUMO3P55854 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.96□□□□□ -0.01
SUMO3P55854 SPDYE9P-201ENST00000570642 692 ntBASIC14.96□□□□□ -0.01
SUMO3P55854 SPDYE10P-202ENST00000612005 668 ntBASIC14.96□□□□□ -0.01
SUMO3P55854 SPDYE8P-202ENST00000612377 668 ntBASIC14.96□□□□□ -0.01
SUMO3P55854 AC008267.7-201ENST00000624570 1194 ntBASIC14.96□□□□□ -0.01
SUMO3P55854 AC005622.1-201ENST00000636801 1703 ntBASIC14.96□□□□□ -0.01
SUMO3P55854 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SUMO3P55854 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.96□□□□□ -0.01
SUMO3P55854 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SUMO3P55854 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SUMO3P55854 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.96□□□□□ -0.02
SUMO3P55854 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.96□□□□□ -0.02
SUMO3P55854 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.96□□□□□ -0.02
SUMO3P55854 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SUMO3P55854 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SUMO3P55854 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SUMO3P55854 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.95□□□□□ -0.02
SUMO3P55854 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 CYP2T1P-202ENST00000641596 2535 ntBASIC14.95□□□□□ -0.02
SUMO3P55854 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SUMO3P55854 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SUMO3P55854 UPF3AP3-201ENST00000420996 769 ntBASIC14.95□□□□□ -0.02
SUMO3P55854 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.95□□□□□ -0.02
SUMO3P55854 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.95□□□□□ -0.02
SUMO3P55854 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 KRT8P23-201ENST00000560090 1207 ntBASIC14.95□□□□□ -0.02
SUMO3P55854 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.95□□□□□ -0.02
SUMO3P55854 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.95□□□□□ -0.02
SUMO3P55854 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms