Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HADHBP55084 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHBP55084 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
HADHBP55084 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHBP55084 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HADHBP55084 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHBP55084 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HADHBP55084 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
HADHBP55084 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HADHBP55084 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.3■□□□□ 0.36
HADHBP55084 AC022532.1-201ENST00000624563 1728 ntBASIC17.3■□□□□ 0.36
HADHBP55084 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.3■□□□□ 0.36
HADHBP55084 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.29■□□□□ 0.36
HADHBP55084 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HADHBP55084 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 AC093724.1-201ENST00000448659 1027 ntBASIC17.29■□□□□ 0.36
HADHBP55084 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 AC148477.8-201ENST00000624298 468 ntBASIC17.29■□□□□ 0.36
HADHBP55084 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
HADHBP55084 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.29■□□□□ 0.36
HADHBP55084 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HADHBP55084 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
HADHBP55084 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.28■□□□□ 0.36
HADHBP55084 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.28■□□□□ 0.36
HADHBP55084 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HADHBP55084 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.28■□□□□ 0.36
HADHBP55084 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HADHBP55084 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.28■□□□□ 0.36
HADHBP55084 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
HADHBP55084 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.28■□□□□ 0.36
HADHBP55084 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.28■□□□□ 0.36
HADHBP55084 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.28■□□□□ 0.36
HADHBP55084 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.28■□□□□ 0.36
HADHBP55084 AC109635.5-201ENST00000533593 962 ntBASIC17.28■□□□□ 0.36
HADHBP55084 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.28■□□□□ 0.36
HADHBP55084 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.28■□□□□ 0.36
HADHBP55084 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.28■□□□□ 0.36
HADHBP55084 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.28■□□□□ 0.36
HADHBP55084 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
HADHBP55084 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HADHBP55084 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.28■□□□□ 0.36
HADHBP55084 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.28■□□□□ 0.36
HADHBP55084 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HADHBP55084 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HADHBP55084 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.28■□□□□ 0.36
HADHBP55084 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HADHBP55084 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HADHBP55084 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HADHBP55084 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HADHBP55084 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms