Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK2P49760 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.65■□□□□ 0.58
CLK2P49760 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK2P49760 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.65■□□□□ 0.58
CLK2P49760 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLK2P49760 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLK2P49760 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK2P49760 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK2P49760 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLK2P49760 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.65■□□□□ 0.58
CLK2P49760 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLK2P49760 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.64■□□□□ 0.58
CLK2P49760 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CLK2P49760 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
CLK2P49760 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
CLK2P49760 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CLK2P49760 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK2P49760 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.64■□□□□ 0.57
CLK2P49760 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLK2P49760 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CLK2P49760 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLK2P49760 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.64■□□□□ 0.57
CLK2P49760 AL645939.2-201ENST00000427340 991 ntBASIC18.64■□□□□ 0.57
CLK2P49760 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.64■□□□□ 0.57
CLK2P49760 AC025678.2-201ENST00000562061 970 ntBASIC18.64■□□□□ 0.57
CLK2P49760 AC004449.1-201ENST00000564240 433 ntBASIC18.64■□□□□ 0.57
CLK2P49760 AC051619.7-201ENST00000568314 623 ntBASIC18.64■□□□□ 0.57
CLK2P49760 AC018529.1-201ENST00000613063 361 ntBASIC18.64■□□□□ 0.57
CLK2P49760 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.64■□□□□ 0.57
CLK2P49760 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLK2P49760 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.64■□□□□ 0.57
CLK2P49760 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.64■□□□□ 0.57
CLK2P49760 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLK2P49760 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.64■□□□□ 0.57
CLK2P49760 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK2P49760 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.64■□□□□ 0.57
CLK2P49760 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLK2P49760 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.64■□□□□ 0.57
CLK2P49760 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLK2P49760 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CLK2P49760 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CLK2P49760 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLK2P49760 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
CLK2P49760 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.63■□□□□ 0.57
CLK2P49760 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLK2P49760 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLK2P49760 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLK2P49760 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLK2P49760 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.63■□□□□ 0.57
CLK2P49760 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLK2P49760 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLK2P49760 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.63■□□□□ 0.57
CLK2P49760 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.63■□□□□ 0.57
CLK2P49760 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.63■□□□□ 0.57
CLK2P49760 RFPL4AP1-201ENST00000530883 850 ntBASIC18.63■□□□□ 0.57
CLK2P49760 BANF1P1-201ENST00000553684 263 ntBASIC18.63■□□□□ 0.57
CLK2P49760 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.63■□□□□ 0.57
CLK2P49760 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.63■□□□□ 0.57
CLK2P49760 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.63■□□□□ 0.57
CLK2P49760 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.63■□□□□ 0.57
CLK2P49760 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.63■□□□□ 0.57
CLK2P49760 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.63■□□□□ 0.57
CLK2P49760 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLK2P49760 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK2P49760 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.62■□□□□ 0.57
CLK2P49760 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK2P49760 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK2P49760 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLK2P49760 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLK2P49760 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK2P49760 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.62■□□□□ 0.57
CLK2P49760 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLK2P49760 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.62■□□□□ 0.57
CLK2P49760 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.62■□□□□ 0.57
CLK2P49760 RNA5SP410-201ENST00000516285 106 ntBASIC18.62■□□□□ 0.57
CLK2P49760 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms