Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDKN2BP42772 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKN2BP42772 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.12■□□□□ 0.33
CDKN2BP42772 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDKN2BP42772 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKN2BP42772 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKN2BP42772 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2BP42772 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDKN2BP42772 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2BP42772 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2BP42772 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2BP42772 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2BP42772 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2BP42772 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2BP42772 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKN2BP42772 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKN2BP42772 AC132872.4-202ENST00000622924 2756 ntBASIC17.11■□□□□ 0.33
CDKN2BP42772 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
CDKN2BP42772 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2BP42772 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2BP42772 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2BP42772 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2BP42772 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2BP42772 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2BP42772 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDKN2BP42772 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2BP42772 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2BP42772 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CDKN2BP42772 AC009078.2-202ENST00000463353 338 ntBASIC17.11■□□□□ 0.33
CDKN2BP42772 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2BP42772 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2BP42772 AC093909.1-201ENST00000504731 1122 ntBASIC17.11■□□□□ 0.33
CDKN2BP42772 AL662844.1-201ENST00000546340 181 ntBASIC17.11■□□□□ 0.33
CDKN2BP42772 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.11■□□□□ 0.33
CDKN2BP42772 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2BP42772 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKN2BP42772 AC010507.1-201ENST00000633895 436 ntBASIC17.11■□□□□ 0.33
CDKN2BP42772 HLA-A-201ENST00000376802 1334 ntBASIC17.11■□□□□ 0.33
CDKN2BP42772 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CDKN2BP42772 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKN2BP42772 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
CDKN2BP42772 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CDKN2BP42772 AL592424.1-201ENST00000563624 1536 ntBASIC17.11■□□□□ 0.33
CDKN2BP42772 AL162727.3-201ENST00000635661 2787 ntBASIC17.11■□□□□ 0.33
CDKN2BP42772 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDKN2BP42772 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKN2BP42772 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDKN2BP42772 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.1■□□□□ 0.33
CDKN2BP42772 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2BP42772 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2BP42772 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2BP42772 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDKN2BP42772 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2BP42772 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 RHOQP3-201ENST00000437982 621 ntBASIC17.1■□□□□ 0.33
CDKN2BP42772 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2BP42772 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2BP42772 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2BP42772 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDKN2BP42772 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
CDKN2BP42772 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDKN2BP42772 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.1■□□□□ 0.33
CDKN2BP42772 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2BP42772 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKN2BP42772 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2BP42772 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2BP42772 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2BP42772 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2BP42772 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKN2BP42772 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2BP42772 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKN2BP42772 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKN2BP42772 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDKN2BP42772 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CDKN2BP42772 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms