Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.16■□□□□ 0.18
HOXA6P31267 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.16■□□□□ 0.18
HOXA6P31267 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.16■□□□□ 0.18
HOXA6P31267 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.16■□□□□ 0.18
HOXA6P31267 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXA6P31267 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXA6P31267 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXA6P31267 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HOXA6P31267 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.16■□□□□ 0.18
HOXA6P31267 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HOXA6P31267 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXA6P31267 KRT8P22-201ENST00000562317 1415 ntBASIC16.16■□□□□ 0.18
HOXA6P31267 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXA6P31267 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXA6P31267 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXA6P31267 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
HOXA6P31267 AC093525.8-201ENST00000624099 1342 ntBASIC16.16■□□□□ 0.18
HOXA6P31267 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HOXA6P31267 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HOXA6P31267 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.15■□□□□ 0.18
HOXA6P31267 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.15■□□□□ 0.18
HOXA6P31267 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 CTBP2P5-201ENST00000454986 1264 ntBASIC16.15■□□□□ 0.18
HOXA6P31267 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.15■□□□□ 0.18
HOXA6P31267 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.15■□□□□ 0.18
HOXA6P31267 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.15■□□□□ 0.18
HOXA6P31267 AL365330.1-201ENST00000607459 531 ntBASIC16.15■□□□□ 0.18
HOXA6P31267 AL022328.1-201ENST00000610050 478 ntBASIC16.15■□□□□ 0.18
HOXA6P31267 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.15■□□□□ 0.18
HOXA6P31267 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HOXA6P31267 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HOXA6P31267 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HOXA6P31267 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HOXA6P31267 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.14■□□□□ 0.17
HOXA6P31267 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
HOXA6P31267 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.14■□□□□ 0.17
HOXA6P31267 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXA6P31267 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.14■□□□□ 0.17
HOXA6P31267 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.14■□□□□ 0.17
HOXA6P31267 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXA6P31267 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HOXA6P31267 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.14■□□□□ 0.17
HOXA6P31267 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.14■□□□□ 0.17
HOXA6P31267 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HOXA6P31267 AC036164.1-201ENST00000570544 333 ntBASIC16.14■□□□□ 0.17
HOXA6P31267 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXA6P31267 AC133539.2-201ENST00000604757 467 ntBASIC16.14■□□□□ 0.17
HOXA6P31267 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXA6P31267 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXA6P31267 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.14■□□□□ 0.17
HOXA6P31267 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HOXA6P31267 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
HOXA6P31267 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HOXA6P31267 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.14■□□□□ 0.17
HOXA6P31267 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HOXA6P31267 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA6P31267 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.13■□□□□ 0.17
HOXA6P31267 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA6P31267 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HOXA6P31267 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HOXA6P31267 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA6P31267 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HOXA6P31267 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HOXA6P31267 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.13■□□□□ 0.17
HOXA6P31267 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.13■□□□□ 0.17
HOXA6P31267 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.13■□□□□ 0.17
HOXA6P31267 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.13■□□□□ 0.17
HOXA6P31267 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms