Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHMLP26374 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMLP26374 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMLP26374 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHMLP26374 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMLP26374 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMLP26374 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CHMLP26374 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHMLP26374 AC007950.2-201ENST00000615045 2347 ntBASIC19.93■□□□□ 0.78
CHMLP26374 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMLP26374 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHMLP26374 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMLP26374 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMLP26374 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMLP26374 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMLP26374 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.93■□□□□ 0.78
CHMLP26374 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMLP26374 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
CHMLP26374 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.93■□□□□ 0.78
CHMLP26374 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.93■□□□□ 0.78
CHMLP26374 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.93■□□□□ 0.78
CHMLP26374 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 AC022188.1-201ENST00000620960 1664 ntBASIC19.93■□□□□ 0.78
CHMLP26374 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMLP26374 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHMLP26374 ZNF259P1-201ENST00000407656 1365 ntBASIC19.93■□□□□ 0.78
CHMLP26374 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHMLP26374 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMLP26374 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMLP26374 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
CHMLP26374 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMLP26374 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHMLP26374 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMLP26374 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHMLP26374 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMLP26374 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.92■□□□□ 0.78
CHMLP26374 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMLP26374 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CHMLP26374 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHMLP26374 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 PDPK2P-202ENST00000562415 1191 ntBASIC19.92■□□□□ 0.78
CHMLP26374 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.92■□□□□ 0.78
CHMLP26374 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
CHMLP26374 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHMLP26374 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHMLP26374 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMLP26374 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHMLP26374 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CHMLP26374 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.92■□□□□ 0.78
CHMLP26374 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMLP26374 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 AC016027.1-202ENST00000607927 1699 ntBASIC19.91■□□□□ 0.78
CHMLP26374 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMLP26374 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.91■□□□□ 0.78
CHMLP26374 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMLP26374 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.91■□□□□ 0.78
CHMLP26374 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMLP26374 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMLP26374 AP002472.1-201ENST00000577490 586 ntBASIC19.91■□□□□ 0.78
CHMLP26374 AL078644.1-201ENST00000609881 752 ntBASIC19.91■□□□□ 0.78
CHMLP26374 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMLP26374 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMLP26374 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms