Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP24386 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CHMP24386 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP24386 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP24386 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP24386 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CHMP24386 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 PTCHD3P3-201ENST00000403073 906 ntBASIC15.55■□□□□ 0.08
CHMP24386 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CHMP24386 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP24386 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHMP24386 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP24386 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP24386 AC034105.1-201ENST00000563488 319 ntBASIC15.55■□□□□ 0.08
CHMP24386 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.55■□□□□ 0.08
CHMP24386 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP24386 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CHMP24386 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.54■□□□□ 0.08
CHMP24386 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.54■□□□□ 0.08
CHMP24386 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CHMP24386 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.54■□□□□ 0.08
CHMP24386 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CHMP24386 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CHMP24386 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CHMP24386 AC009947.1-201ENST00000444350 727 ntBASIC15.54■□□□□ 0.08
CHMP24386 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CHMP24386 AC108751.1-201ENST00000490852 363 ntBASIC15.54■□□□□ 0.08
CHMP24386 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.54■□□□□ 0.08
CHMP24386 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.54■□□□□ 0.08
CHMP24386 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 AC027601.4-201ENST00000611259 610 ntBASIC15.54■□□□□ 0.08
CHMP24386 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CHMP24386 FAM197Y3-203ENST00000618346 717 ntBASIC15.54■□□□□ 0.08
CHMP24386 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CHMP24386 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.54■□□□□ 0.08
CHMP24386 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CHMP24386 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CHMP24386 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.54■□□□□ 0.08
CHMP24386 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CHMP24386 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHMP24386 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP24386 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.53■□□□□ 0.08
CHMP24386 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP24386 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP24386 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP24386 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP24386 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.53■□□□□ 0.08
CHMP24386 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP24386 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.53■□□□□ 0.08
CHMP24386 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP24386 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 TERC-201ENST00000602385 541 ntBASIC15.53■□□□□ 0.08
CHMP24386 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHMP24386 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP24386 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHMP24386 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.53■□□□□ 0.08
CHMP24386 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHMP24386 MTHFR-217ENST00000641820 1569 ntBASIC15.53■□□□□ 0.08
CHMP24386 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms