Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CAPN3P20807 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CAPN3P20807 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.01■□□□□ 0.15
CAPN3P20807 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN3P20807 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CAPN3P20807 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
CAPN3P20807 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CAPN3P20807 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN3P20807 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN3P20807 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN3P20807 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CAPN3P20807 ZNF259P1-201ENST00000407656 1365 ntBASIC16■□□□□ 0.15
CAPN3P20807 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
CAPN3P20807 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CAPN3P20807 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16■□□□□ 0.15
CAPN3P20807 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16■□□□□ 0.15
CAPN3P20807 POM121L3P-201ENST00000419331 1163 ntBASIC16■□□□□ 0.15
CAPN3P20807 HNRNPA1P28-201ENST00000424481 961 ntBASIC16■□□□□ 0.15
CAPN3P20807 ABCD1P5-201ENST00000445663 754 ntBASIC16■□□□□ 0.15
CAPN3P20807 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 AF238378.1-201ENST00000526806 358 ntBASIC16■□□□□ 0.15
CAPN3P20807 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16■□□□□ 0.15
CAPN3P20807 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16■□□□□ 0.15
CAPN3P20807 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16■□□□□ 0.15
CAPN3P20807 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 AC104640.1-201ENST00000562617 2109 ntBASIC16■□□□□ 0.15
CAPN3P20807 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CAPN3P20807 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CAPN3P20807 TOP3BP1-201ENST00000420768 1380 ntBASIC16■□□□□ 0.15
CAPN3P20807 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16■□□□□ 0.15
CAPN3P20807 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16■□□□□ 0.15
CAPN3P20807 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CAPN3P20807 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CAPN3P20807 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CAPN3P20807 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CAPN3P20807 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CAPN3P20807 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN3P20807 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN3P20807 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN3P20807 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN3P20807 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN3P20807 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN3P20807 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.99■□□□□ 0.15
CAPN3P20807 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN3P20807 POLD2P1-201ENST00000511220 997 ntBASIC15.99■□□□□ 0.15
CAPN3P20807 SLC25A1P1-201ENST00000528351 927 ntBASIC15.99■□□□□ 0.15
CAPN3P20807 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.99■□□□□ 0.15
CAPN3P20807 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.99■□□□□ 0.15
CAPN3P20807 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN3P20807 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN3P20807 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPN3P20807 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CAPN3P20807 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.99■□□□□ 0.15
CAPN3P20807 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CAPN3P20807 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPN3P20807 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CAPN3P20807 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CAPN3P20807 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 AC002310.6-201ENST00000624451 1377 ntBASIC15.99■□□□□ 0.15
CAPN3P20807 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CAPN3P20807 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPN3P20807 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms