Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.86■□□□□ 0.29
NFKB1P19838 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NFKB1P19838 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NFKB1P19838 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
NFKB1P19838 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.86■□□□□ 0.29
NFKB1P19838 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NFKB1P19838 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.86■□□□□ 0.29
NFKB1P19838 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.86■□□□□ 0.29
NFKB1P19838 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NFKB1P19838 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NFKB1P19838 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NFKB1P19838 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NFKB1P19838 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NFKB1P19838 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NFKB1P19838 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.86■□□□□ 0.29
NFKB1P19838 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NFKB1P19838 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NFKB1P19838 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.85■□□□□ 0.29
NFKB1P19838 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 AL391005.1-201ENST00000623953 2435 ntBASIC16.85■□□□□ 0.29
NFKB1P19838 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NFKB1P19838 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 PMS2P4-201ENST00000412466 1052 ntBASIC16.85■□□□□ 0.29
NFKB1P19838 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.85■□□□□ 0.29
NFKB1P19838 KRT19P2-202ENST00000557173 1012 ntBASIC16.85■□□□□ 0.29
NFKB1P19838 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.85■□□□□ 0.29
NFKB1P19838 AC106730.1-201ENST00000566722 1090 ntBASIC16.85■□□□□ 0.29
NFKB1P19838 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.85■□□□□ 0.29
NFKB1P19838 AC140113.2-201ENST00000604370 208 ntBASIC16.85■□□□□ 0.29
NFKB1P19838 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.85■□□□□ 0.29
NFKB1P19838 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NFKB1P19838 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.85■□□□□ 0.29
NFKB1P19838 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.85■□□□□ 0.29
NFKB1P19838 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.84■□□□□ 0.29
NFKB1P19838 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 AC026691.1-201ENST00000602502 2017 ntBASIC16.84■□□□□ 0.29
NFKB1P19838 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NFKB1P19838 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
NFKB1P19838 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NFKB1P19838 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NFKB1P19838 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NFKB1P19838 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.84■□□□□ 0.29
NFKB1P19838 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.84■□□□□ 0.29
NFKB1P19838 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.84■□□□□ 0.29
NFKB1P19838 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.84■□□□□ 0.29
NFKB1P19838 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 MTHFR-217ENST00000641820 1569 ntBASIC16.84■□□□□ 0.29
NFKB1P19838 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NFKB1P19838 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.84■□□□□ 0.29
NFKB1P19838 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms