Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC2P18074 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.02■□□□□ 0.32
ERCC2P18074 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.02■□□□□ 0.32
ERCC2P18074 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.02■□□□□ 0.32
ERCC2P18074 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.02■□□□□ 0.32
ERCC2P18074 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
ERCC2P18074 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.02■□□□□ 0.32
ERCC2P18074 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.02■□□□□ 0.32
ERCC2P18074 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 AC091812.2-201ENST00000619081 385 ntBASIC17.02■□□□□ 0.32
ERCC2P18074 AL161645.1-201ENST00000622716 1255 ntBASIC17.02■□□□□ 0.32
ERCC2P18074 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ERCC2P18074 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ERCC2P18074 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC2P18074 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC2P18074 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
ERCC2P18074 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
ERCC2P18074 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC2P18074 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ERCC2P18074 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.02■□□□□ 0.31
ERCC2P18074 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ERCC2P18074 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.01■□□□□ 0.31
ERCC2P18074 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC2P18074 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC2P18074 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ERCC2P18074 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
ERCC2P18074 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ERCC2P18074 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ERCC2P18074 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 FAM58CP-201ENST00000435741 640 ntBASIC17.01■□□□□ 0.31
ERCC2P18074 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 POU5F1P6-201ENST00000466990 990 ntBASIC17.01■□□□□ 0.31
ERCC2P18074 KRT18P34-201ENST00000488218 1270 ntBASIC17.01■□□□□ 0.31
ERCC2P18074 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.01■□□□□ 0.31
ERCC2P18074 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.01■□□□□ 0.31
ERCC2P18074 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.01■□□□□ 0.31
ERCC2P18074 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC2P18074 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ERCC2P18074 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ERCC2P18074 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 WASH6P-202ENST00000359512 1437 ntBASIC17.01■□□□□ 0.31
ERCC2P18074 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC2P18074 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.01■□□□□ 0.31
ERCC2P18074 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC2P18074 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
ERCC2P18074 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ERCC2P18074 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC2P18074 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17■□□□□ 0.31
ERCC2P18074 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC2P18074 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms