Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.82■□□□□ 0.44
SYN1P17600 AC061975.2-201ENST00000581722 295 ntBASIC17.82■□□□□ 0.44
SYN1P17600 AC016629.1-201ENST00000596579 586 ntBASIC17.82■□□□□ 0.44
SYN1P17600 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SYN1P17600 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.82■□□□□ 0.44
SYN1P17600 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.82■□□□□ 0.44
SYN1P17600 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.82■□□□□ 0.44
SYN1P17600 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.82■□□□□ 0.44
SYN1P17600 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SYN1P17600 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.82■□□□□ 0.44
SYN1P17600 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.82■□□□□ 0.44
SYN1P17600 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SYN1P17600 AC108860.2-201ENST00000562760 2183 ntBASIC17.81■□□□□ 0.44
SYN1P17600 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.81■□□□□ 0.44
SYN1P17600 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SYN1P17600 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.81■□□□□ 0.44
SYN1P17600 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.81■□□□□ 0.44
SYN1P17600 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
SYN1P17600 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SYN1P17600 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SYN1P17600 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.81■□□□□ 0.44
SYN1P17600 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.81■□□□□ 0.44
SYN1P17600 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SYN1P17600 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.81■□□□□ 0.44
SYN1P17600 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.81■□□□□ 0.44
SYN1P17600 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.81■□□□□ 0.44
SYN1P17600 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.81■□□□□ 0.44
SYN1P17600 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.81■□□□□ 0.44
SYN1P17600 AC025048.3-201ENST00000590609 569 ntBASIC17.81■□□□□ 0.44
SYN1P17600 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.81■□□□□ 0.44
SYN1P17600 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.81■□□□□ 0.44
SYN1P17600 AC005702.4-201ENST00000618393 416 ntBASIC17.81■□□□□ 0.44
SYN1P17600 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.81■□□□□ 0.44
SYN1P17600 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.81■□□□□ 0.44
SYN1P17600 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.81■□□□□ 0.44
SYN1P17600 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SYN1P17600 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SYN1P17600 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.8■□□□□ 0.44
SYN1P17600 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.8■□□□□ 0.44
SYN1P17600 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SYN1P17600 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SYN1P17600 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.8■□□□□ 0.44
SYN1P17600 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.8■□□□□ 0.44
SYN1P17600 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.8■□□□□ 0.44
SYN1P17600 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.8■□□□□ 0.44
SYN1P17600 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.8■□□□□ 0.44
SYN1P17600 U62317.3-201ENST00000608319 855 ntBASIC17.8■□□□□ 0.44
SYN1P17600 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.8■□□□□ 0.44
SYN1P17600 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SYN1P17600 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SYN1P17600 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.8■□□□□ 0.44
SYN1P17600 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SYN1P17600 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SYN1P17600 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.8■□□□□ 0.44
SYN1P17600 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SYN1P17600 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms