Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.96□□□□□ -0.34
CD28P10747 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CD28P10747 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 LINC02012-201ENST00000608206 1725 ntBASIC12.96□□□□□ -0.34
CD28P10747 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CD28P10747 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.96□□□□□ -0.34
CD28P10747 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.96□□□□□ -0.34
CD28P10747 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CD28P10747 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.96□□□□□ -0.34
CD28P10747 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.95□□□□□ -0.34
CD28P10747 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.95□□□□□ -0.34
CD28P10747 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CD28P10747 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.95□□□□□ -0.34
CD28P10747 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CD28P10747 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD28P10747 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CD28P10747 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.95□□□□□ -0.34
CD28P10747 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CD28P10747 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.95□□□□□ -0.34
CD28P10747 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.95□□□□□ -0.34
CD28P10747 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.95□□□□□ -0.34
CD28P10747 KRT18P34-201ENST00000488218 1270 ntBASIC12.95□□□□□ -0.34
CD28P10747 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.95□□□□□ -0.34
CD28P10747 AC069120.2-201ENST00000524091 540 ntBASIC12.95□□□□□ -0.34
CD28P10747 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.95□□□□□ -0.34
CD28P10747 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 MIR4453-201ENST00000584019 89 ntBASIC12.95□□□□□ -0.34
CD28P10747 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.95□□□□□ -0.34
CD28P10747 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.95□□□□□ -0.34
CD28P10747 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CD28P10747 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 AC108860.2-201ENST00000562760 2183 ntBASIC12.95□□□□□ -0.34
CD28P10747 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.95□□□□□ -0.34
CD28P10747 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.95□□□□□ -0.34
CD28P10747 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CD28P10747 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD28P10747 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.95□□□□□ -0.34
CD28P10747 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CD28P10747 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CD28P10747 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CD28P10747 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.95□□□□□ -0.34
CD28P10747 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CD28P10747 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 AC007326.2-201ENST00000624224 7579 ntBASIC12.94□□□□□ -0.34
CD28P10747 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CD28P10747 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 AC092053.1-201ENST00000605787 1936 ntBASIC12.94□□□□□ -0.34
CD28P10747 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
CD28P10747 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CD28P10747 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.94□□□□□ -0.34
CD28P10747 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms