Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ELK1P1-201ENST00000485699 580 ntBASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 PCDHB17P-201ENST00000539533 2393 ntBASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSB-PGBD3P0DP91 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 AC061975.2-201ENST00000581722 295 ntBASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSB-PGBD3P0DP91 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CSB-PGBD3P0DP91 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
CSB-PGBD3P0DP91 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 TMEM14DP-201ENST00000422205 345 ntBASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 AL512343.1-201ENST00000605837 169 ntBASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 MIR6069-201ENST00000620069 79 ntBASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSB-PGBD3P0DP91 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 SPDYE17-201ENST00000412399 783 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms