Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 HLA-J-203ENST00000494367 1087 ntBASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCNYL3P0C7X3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 LINC02012-201ENST00000608206 1725 ntBASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 AC005237.2-201ENST00000434368 219 ntBASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 RN7SL589P-201ENST00000481268 310 ntBASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 AC092364.2-202ENST00000597012 1073 ntBASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 AL161645.1-201ENST00000622716 1255 ntBASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 AC106886.4-201ENST00000623557 2502 ntBASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCNYL3P0C7X3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 AL139400.1-201ENST00000366220 510 ntBASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 AC107918.2-201ENST00000530817 355 ntBASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms