Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC01023-201ENST00000606054 436 ntBASIC18.34■□□□□ 0.53
TPM1P09493 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM1P09493 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM1P09493 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM1P09493 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 GGT3P-204ENST00000453783 1664 ntBASIC18.34■□□□□ 0.53
TPM1P09493 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.34■□□□□ 0.53
TPM1P09493 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM1P09493 AL136379.1-201ENST00000623471 2642 ntBASIC18.34■□□□□ 0.53
TPM1P09493 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TPM1P09493 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TPM1P09493 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM1P09493 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM1P09493 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM1P09493 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM1P09493 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM1P09493 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM1P09493 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM1P09493 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TPM1P09493 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM1P09493 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.33■□□□□ 0.53
TPM1P09493 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM1P09493 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPM1P09493 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.33■□□□□ 0.52
TPM1P09493 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.33■□□□□ 0.52
TPM1P09493 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.33■□□□□ 0.52
TPM1P09493 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
TPM1P09493 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.33■□□□□ 0.52
TPM1P09493 AC066615.1-201ENST00000640911 628 ntBASIC18.33■□□□□ 0.52
TPM1P09493 AP000867.4-201ENST00000641616 219 ntBASIC18.33■□□□□ 0.52
TPM1P09493 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TPM1P09493 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.33■□□□□ 0.52
TPM1P09493 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.33■□□□□ 0.52
TPM1P09493 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPM1P09493 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 SIGLEC16-201ENST00000599858 1437 ntBASIC18.32■□□□□ 0.52
TPM1P09493 AC004817.3-201ENST00000602957 2129 ntBASIC18.32■□□□□ 0.52
TPM1P09493 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM1P09493 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM1P09493 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TPM1P09493 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM1P09493 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM1P09493 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TPM1P09493 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 RCN1P2-201ENST00000398357 915 ntBASIC18.32■□□□□ 0.52
TPM1P09493 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM1P09493 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TPM1P09493 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.32■□□□□ 0.52
TPM1P09493 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM1P09493 TERC-201ENST00000602385 541 ntBASIC18.32■□□□□ 0.52
TPM1P09493 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM1P09493 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TPM1P09493 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TPM1P09493 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.32■□□□□ 0.52
TPM1P09493 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.32■□□□□ 0.52
TPM1P09493 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPM1P09493 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM1P09493 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPM1P09493 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms