Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN1P07384 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CAPN1P07384 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN1P07384 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN1P07384 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CAPN1P07384 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN1P07384 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CAPN1P07384 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 AC006538.1-201ENST00000567905 1585 ntBASIC16.36■□□□□ 0.21
CAPN1P07384 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN1P07384 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CAPN1P07384 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CAPN1P07384 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
CAPN1P07384 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN1P07384 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN1P07384 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.36■□□□□ 0.21
CAPN1P07384 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CAPN1P07384 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN1P07384 HLA-J-202ENST00000469281 1241 ntBASIC16.36■□□□□ 0.21
CAPN1P07384 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.36■□□□□ 0.21
CAPN1P07384 AL805961.1-202ENST00000641562 540 ntBASIC16.36■□□□□ 0.21
CAPN1P07384 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CAPN1P07384 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN1P07384 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CAPN1P07384 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN1P07384 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.36■□□□□ 0.21
CAPN1P07384 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN1P07384 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CAPN1P07384 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 AC006277.1-201ENST00000624348 1610 ntBASIC16.35■□□□□ 0.21
CAPN1P07384 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
CAPN1P07384 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 CYP2T1P-202ENST00000641596 2535 ntBASIC16.35■□□□□ 0.21
CAPN1P07384 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 PRSS29P-201ENST00000440800 595 ntBASIC16.35■□□□□ 0.21
CAPN1P07384 VN2R19P-201ENST00000442399 1052 ntBASIC16.35■□□□□ 0.21
CAPN1P07384 HCG4B-203ENST00000450128 991 ntBASIC16.35■□□□□ 0.21
CAPN1P07384 AC092183.1-201ENST00000469884 875 ntBASIC16.35■□□□□ 0.21
CAPN1P07384 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CAPN1P07384 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN1P07384 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 AC002347.1-201ENST00000569543 541 ntBASIC16.35■□□□□ 0.21
CAPN1P07384 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN1P07384 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 AC004790.2-201ENST00000623588 572 ntBASIC16.35■□□□□ 0.21
CAPN1P07384 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN1P07384 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN1P07384 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CAPN1P07384 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN1P07384 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CAPN1P07384 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN1P07384 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.34■□□□□ 0.21
CAPN1P07384 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN1P07384 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CAPN1P07384 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN1P07384 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN1P07384 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CAPN1P07384 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms