Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MYCNP04198 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.26■□□□□ 0.67
MYCNP04198 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.26■□□□□ 0.67
MYCNP04198 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MYCNP04198 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MYCNP04198 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
MYCNP04198 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 AL121929.2-201ENST00000609691 1432 ntBASIC19.25■□□□□ 0.67
MYCNP04198 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MYCNP04198 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MYCNP04198 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MYCNP04198 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 AL135999.2-201ENST00000622438 1686 ntBASIC19.25■□□□□ 0.67
MYCNP04198 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.25■□□□□ 0.67
MYCNP04198 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.25■□□□□ 0.67
MYCNP04198 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC19.25■□□□□ 0.67
MYCNP04198 TAAR4P-201ENST00000454843 1039 ntBASIC19.25■□□□□ 0.67
MYCNP04198 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.25■□□□□ 0.67
MYCNP04198 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.25■□□□□ 0.67
MYCNP04198 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.25■□□□□ 0.67
MYCNP04198 SLC25A6P2-201ENST00000497974 877 ntBASIC19.25■□□□□ 0.67
MYCNP04198 AC079140.1-201ENST00000508039 487 ntBASIC19.25■□□□□ 0.67
MYCNP04198 FAM86C2P-203ENST00000528684 1004 ntBASIC19.25■□□□□ 0.67
MYCNP04198 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.25■□□□□ 0.67
MYCNP04198 AL137802.2-201ENST00000562878 1110 ntBASIC19.25■□□□□ 0.67
MYCNP04198 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.25■□□□□ 0.67
MYCNP04198 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.25■□□□□ 0.67
MYCNP04198 AC006386.1-201ENST00000619436 415 ntBASIC19.25■□□□□ 0.67
MYCNP04198 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 AC046185.3-201ENST00000623228 1824 ntBASIC19.25■□□□□ 0.67
MYCNP04198 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.25■□□□□ 0.67
MYCNP04198 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MYCNP04198 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
MYCNP04198 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.25■□□□□ 0.67
MYCNP04198 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.24■□□□□ 0.67
MYCNP04198 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
MYCNP04198 AC018470.1-201ENST00000624790 3129 ntBASIC19.24■□□□□ 0.67
MYCNP04198 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.24■□□□□ 0.67
MYCNP04198 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.24■□□□□ 0.67
MYCNP04198 TRAF3IP3-201ENST00000367023 1065 ntTSL 3 BASIC19.24■□□□□ 0.67
MYCNP04198 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 VDAC1P12-201ENST00000451853 882 ntBASIC19.24■□□□□ 0.67
MYCNP04198 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 AC087163.2-201ENST00000457299 853 ntBASIC19.24■□□□□ 0.67
MYCNP04198 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 TERF1P3-201ENST00000505638 1227 ntBASIC19.24■□□□□ 0.67
MYCNP04198 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MYCNP04198 COL6A4P2-205ENST00000509855 506 ntBASIC19.24■□□□□ 0.67
MYCNP04198 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.24■□□□□ 0.67
MYCNP04198 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC19.24■□□□□ 0.67
MYCNP04198 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC19.24■□□□□ 0.67
MYCNP04198 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.24■□□□□ 0.67
MYCNP04198 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.24■□□□□ 0.67
MYCNP04198 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.24■□□□□ 0.67
MYCNP04198 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.24■□□□□ 0.67
MYCNP04198 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.24■□□□□ 0.67
MYCNP04198 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.24■□□□□ 0.67
MYCNP04198 AC099522.2-201ENST00000607001 744 ntBASIC19.24■□□□□ 0.67
MYCNP04198 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.24■□□□□ 0.67
MYCNP04198 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.24■□□□□ 0.67
MYCNP04198 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.24■□□□□ 0.67
MYCNP04198 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MYCNP04198 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MYCNP04198 TUBB3P1-201ENST00000405796 1332 ntBASIC19.24■□□□□ 0.67
MYCNP04198 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.24■□□□□ 0.67
MYCNP04198 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MYCNP04198 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MYCNP04198 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.23■□□□□ 0.67
MYCNP04198 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MYCNP04198 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
MYCNP04198 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MYCNP04198 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
MYCNP04198 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MYCNP04198 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms