Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 AL021920.2-201ENST00000624828 1351 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 FLJ13224-201ENST00000313737 1514 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.93□□□□□ -0.02
SPTA1P02549 MIR663B-201ENST00000408361 115 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.93□□□□□ -0.02
SPTA1P02549 LDHBP1-201ENST00000455730 1119 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.93□□□□□ -0.02
SPTA1P02549 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.93□□□□□ -0.02
SPTA1P02549 MIR6775-201ENST00000617557 69 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 RPSAP52-203ENST00000622976 1023 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.93□□□□□ -0.02
SPTA1P02549 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.93□□□□□ -0.02
SPTA1P02549 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.93□□□□□ -0.02
SPTA1P02549 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SPTA1P02549 MIR1908-201ENST00000410394 80 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 RNA5SP412-201ENST00000516234 123 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SPTA1P02549 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 AC006538.1-201ENST00000567905 1585 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SPTA1P02549 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.93□□□□□ -0.02
SPTA1P02549 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPTA1P02549 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.93□□□□□ -0.02
SPTA1P02549 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
SPTA1P02549 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.92□□□□□ -0.02
SPTA1P02549 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 BTBD6P1-201ENST00000412176 1267 ntBASIC14.92□□□□□ -0.02
SPTA1P02549 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 AC253536.4-201ENST00000440539 267 ntBASIC14.92□□□□□ -0.02
SPTA1P02549 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.92□□□□□ -0.02
SPTA1P02549 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.92□□□□□ -0.02
SPTA1P02549 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.92□□□□□ -0.02
SPTA1P02549 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.92□□□□□ -0.02
SPTA1P02549 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.92□□□□□ -0.02
SPTA1P02549 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SPTA1P02549 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SPTA1P02549 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SPTA1P02549 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.92□□□□□ -0.02
SPTA1P02549 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SPTA1P02549 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.92□□□□□ -0.02
SPTA1P02549 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.92□□□□□ -0.02
SPTA1P02549 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.92□□□□□ -0.02
SPTA1P02549 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms