Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.02■□□□□ 0.32
TOP3BO95985 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP3BO95985 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TOP3BO95985 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.02■□□□□ 0.32
TOP3BO95985 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.02■□□□□ 0.32
TOP3BO95985 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.02■□□□□ 0.32
TOP3BO95985 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP3BO95985 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP3BO95985 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP3BO95985 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
TOP3BO95985 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.02■□□□□ 0.32
TOP3BO95985 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TOP3BO95985 AC004461.1-201ENST00000412461 403 ntBASIC17.02■□□□□ 0.32
TOP3BO95985 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.02■□□□□ 0.32
TOP3BO95985 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TOP3BO95985 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.02■□□□□ 0.32
TOP3BO95985 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.02■□□□□ 0.32
TOP3BO95985 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.02■□□□□ 0.32
TOP3BO95985 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TOP3BO95985 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.02■□□□□ 0.32
TOP3BO95985 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP3BO95985 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TOP3BO95985 AC148477.5-201ENST00000625164 1645 ntBASIC17.02■□□□□ 0.31
TOP3BO95985 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TOP3BO95985 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TOP3BO95985 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TOP3BO95985 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.02■□□□□ 0.31
TOP3BO95985 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TOP3BO95985 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TOP3BO95985 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.01■□□□□ 0.31
TOP3BO95985 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TOP3BO95985 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TOP3BO95985 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TOP3BO95985 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.01■□□□□ 0.31
TOP3BO95985 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.01■□□□□ 0.31
TOP3BO95985 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TOP3BO95985 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.01■□□□□ 0.31
TOP3BO95985 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.01■□□□□ 0.31
TOP3BO95985 DUX4L17-201ENST00000557360 1267 ntBASIC17.01■□□□□ 0.31
TOP3BO95985 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.01■□□□□ 0.31
TOP3BO95985 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TOP3BO95985 AC004835.2-201ENST00000603762 682 ntBASIC17.01■□□□□ 0.31
TOP3BO95985 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TOP3BO95985 AD001527.2-201ENST00000622994 785 ntBASIC17.01■□□□□ 0.31
TOP3BO95985 AC073592.4-201ENST00000623827 446 ntBASIC17.01■□□□□ 0.31
TOP3BO95985 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.01■□□□□ 0.31
TOP3BO95985 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP3BO95985 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.01■□□□□ 0.31
TOP3BO95985 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP3BO95985 AC005052.1-201ENST00000625181 2492 ntBASIC17.01■□□□□ 0.31
TOP3BO95985 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17■□□□□ 0.31
TOP3BO95985 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17■□□□□ 0.31
TOP3BO95985 BCAR1-209ENST00000546196 1340 ntBASIC17■□□□□ 0.31
TOP3BO95985 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17■□□□□ 0.31
TOP3BO95985 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17■□□□□ 0.31
TOP3BO95985 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TOP3BO95985 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms