Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SIX6O95475 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 AC097374.2-201ENST00000618617 1306 ntBASIC13.91□□□□□ -0.18
SIX6O95475 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SIX6O95475 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 AC007326.2-201ENST00000624224 7579 ntBASIC13.91□□□□□ -0.18
SIX6O95475 PTENP1-202ENST00000532280 3996 ntBASIC13.91□□□□□ -0.18
SIX6O95475 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.91□□□□□ -0.18
SIX6O95475 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SIX6O95475 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.91□□□□□ -0.18
SIX6O95475 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.91□□□□□ -0.18
SIX6O95475 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.91□□□□□ -0.18
SIX6O95475 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.91□□□□□ -0.18
SIX6O95475 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.91□□□□□ -0.18
SIX6O95475 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SIX6O95475 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 AL109954.1-202ENST00000564051 2148 ntBASIC13.91□□□□□ -0.18
SIX6O95475 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SIX6O95475 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.91□□□□□ -0.18
SIX6O95475 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.91□□□□□ -0.18
SIX6O95475 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 AC097637.2-201ENST00000624096 1997 ntBASIC13.91□□□□□ -0.18
SIX6O95475 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SIX6O95475 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.9□□□□□ -0.18
SIX6O95475 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.9□□□□□ -0.18
SIX6O95475 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.9□□□□□ -0.18
SIX6O95475 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SIX6O95475 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.9□□□□□ -0.18
SIX6O95475 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 AC005089.1-201ENST00000619486 2241 ntBASIC13.9□□□□□ -0.18
SIX6O95475 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SIX6O95475 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.9□□□□□ -0.18
SIX6O95475 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.9□□□□□ -0.18
SIX6O95475 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.9□□□□□ -0.18
SIX6O95475 UBE2SP1-201ENST00000450587 669 ntBASIC13.9□□□□□ -0.18
SIX6O95475 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.9□□□□□ -0.18
SIX6O95475 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.9□□□□□ -0.18
SIX6O95475 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.9□□□□□ -0.18
SIX6O95475 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SIX6O95475 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.9□□□□□ -0.18
SIX6O95475 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SIX6O95475 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms