Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 KRT18P66-201ENST00000452970 1269 ntBASIC15.89■□□□□ 0.13
GFRA3O60609 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.89■□□□□ 0.13
GFRA3O60609 PRKXP1-201ENST00000561423 1122 ntBASIC15.89■□□□□ 0.13
GFRA3O60609 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
GFRA3O60609 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.89■□□□□ 0.13
GFRA3O60609 AC079336.7-201ENST00000623428 1078 ntBASIC15.89■□□□□ 0.13
GFRA3O60609 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
GFRA3O60609 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
GFRA3O60609 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GFRA3O60609 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.89■□□□□ 0.13
GFRA3O60609 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.88■□□□□ 0.13
GFRA3O60609 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GFRA3O60609 REXO1L11P-201ENST00000620964 1927 ntBASIC15.88■□□□□ 0.13
GFRA3O60609 HCG11-201ENST00000411553 5696 ntBASIC15.88■□□□□ 0.13
GFRA3O60609 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
GFRA3O60609 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.88■□□□□ 0.13
GFRA3O60609 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.88■□□□□ 0.13
GFRA3O60609 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 EEF1DP6-201ENST00000449232 372 ntBASIC15.88■□□□□ 0.13
GFRA3O60609 AC017007.3-201ENST00000479865 435 ntBASIC15.88■□□□□ 0.13
GFRA3O60609 AC134698.3-201ENST00000523880 214 ntBASIC15.88■□□□□ 0.13
GFRA3O60609 PGAM1P5-201ENST00000548011 764 ntBASIC15.88■□□□□ 0.13
GFRA3O60609 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
GFRA3O60609 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.88■□□□□ 0.13
GFRA3O60609 BRI3BPP1-201ENST00000594224 787 ntBASIC15.88■□□□□ 0.13
GFRA3O60609 AP001505.2-201ENST00000616815 443 ntBASIC15.88■□□□□ 0.13
GFRA3O60609 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.88■□□□□ 0.13
GFRA3O60609 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.88■□□□□ 0.13
GFRA3O60609 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GFRA3O60609 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GFRA3O60609 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
GFRA3O60609 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
GFRA3O60609 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.87■□□□□ 0.13
GFRA3O60609 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.87■□□□□ 0.13
GFRA3O60609 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.87■□□□□ 0.13
GFRA3O60609 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.87■□□□□ 0.13
GFRA3O60609 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.87■□□□□ 0.13
GFRA3O60609 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
GFRA3O60609 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
GFRA3O60609 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 CYP46A4P-201ENST00000414953 267 ntBASIC15.87■□□□□ 0.13
GFRA3O60609 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.87■□□□□ 0.13
GFRA3O60609 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.87■□□□□ 0.13
GFRA3O60609 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.87■□□□□ 0.13
GFRA3O60609 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.87■□□□□ 0.13
GFRA3O60609 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.87■□□□□ 0.13
GFRA3O60609 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.87■□□□□ 0.13
GFRA3O60609 FGFR3P5-201ENST00000564496 886 ntBASIC15.87■□□□□ 0.13
GFRA3O60609 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GFRA3O60609 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms