Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.82■□□□□ 0.12
CLOCKO15516 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 AC004870.1-201ENST00000315132 882 ntBASIC15.82■□□□□ 0.12
CLOCKO15516 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.82■□□□□ 0.12
CLOCKO15516 NUS1P1-201ENST00000446295 882 ntBASIC15.82■□□□□ 0.12
CLOCKO15516 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 FOSL1P1-201ENST00000511041 816 ntBASIC15.82■□□□□ 0.12
CLOCKO15516 STK19B-204ENST00000512515 211 ntBASIC15.82■□□□□ 0.12
CLOCKO15516 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.82■□□□□ 0.12
CLOCKO15516 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.82■□□□□ 0.12
CLOCKO15516 AC074051.2-201ENST00000565115 352 ntBASIC15.82■□□□□ 0.12
CLOCKO15516 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.82■□□□□ 0.12
CLOCKO15516 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.82■□□□□ 0.12
CLOCKO15516 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 AC138894.3-201ENST00000603787 634 ntBASIC15.82■□□□□ 0.12
CLOCKO15516 AL592071.1-201ENST00000611956 408 ntBASIC15.82■□□□□ 0.12
CLOCKO15516 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLOCKO15516 AC124864.1-201ENST00000623408 392 ntBASIC15.82■□□□□ 0.12
CLOCKO15516 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLOCKO15516 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 AP002414.2-201ENST00000591780 3365 ntBASIC15.82■□□□□ 0.12
CLOCKO15516 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CLOCKO15516 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.82■□□□□ 0.12
CLOCKO15516 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLOCKO15516 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLOCKO15516 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLOCKO15516 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.81■□□□□ 0.12
CLOCKO15516 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
CLOCKO15516 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.81■□□□□ 0.12
CLOCKO15516 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLOCKO15516 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.81■□□□□ 0.12
CLOCKO15516 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.81■□□□□ 0.12
CLOCKO15516 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.81■□□□□ 0.12
CLOCKO15516 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLOCKO15516 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLOCKO15516 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.81■□□□□ 0.12
CLOCKO15516 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CLOCKO15516 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CLOCKO15516 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.81■□□□□ 0.12
CLOCKO15516 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 AC012615.1-201ENST00000565797 1299 ntBASIC15.81■□□□□ 0.12
CLOCKO15516 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLOCKO15516 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLOCKO15516 Z69720.1-201ENST00000601483 472 ntBASIC15.81■□□□□ 0.12
CLOCKO15516 AL121772.3-201ENST00000610840 674 ntBASIC15.81■□□□□ 0.12
CLOCKO15516 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CLOCKO15516 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.81■□□□□ 0.12
CLOCKO15516 LINC00895-201ENST00000629028 1637 ntBASIC15.81■□□□□ 0.12
CLOCKO15516 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLOCKO15516 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CLOCKO15516 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLOCKO15516 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CLOCKO15516 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLOCKO15516 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms