Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PFDN6O15212 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.64■□□□□ 0.25
PFDN6O15212 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.64■□□□□ 0.25
PFDN6O15212 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.64■□□□□ 0.25
PFDN6O15212 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.64■□□□□ 0.25
PFDN6O15212 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PFDN6O15212 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN6O15212 UBALD1-205ENST00000590891 2641 ntBASIC16.64■□□□□ 0.25
PFDN6O15212 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN6O15212 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 SLC22A20-204ENST00000530038 1673 ntBASIC16.63■□□□□ 0.25
PFDN6O15212 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PFDN6O15212 AC007326.2-201ENST00000624224 7579 ntBASIC16.63■□□□□ 0.25
PFDN6O15212 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PFDN6O15212 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN6O15212 CRYGEP-201ENST00000412192 528 ntBASIC16.63■□□□□ 0.25
PFDN6O15212 AC098831.1-202ENST00000438821 336 ntBASIC16.63■□□□□ 0.25
PFDN6O15212 CXCL1P1-201ENST00000502804 216 ntBASIC16.63■□□□□ 0.25
PFDN6O15212 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PFDN6O15212 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.63■□□□□ 0.25
PFDN6O15212 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PFDN6O15212 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PFDN6O15212 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PFDN6O15212 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PFDN6O15212 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN6O15212 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN6O15212 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
PFDN6O15212 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN6O15212 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PFDN6O15212 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.62■□□□□ 0.25
PFDN6O15212 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PFDN6O15212 FAM185BP-201ENST00000443595 716 ntBASIC16.62■□□□□ 0.25
PFDN6O15212 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
PFDN6O15212 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN6O15212 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.62■□□□□ 0.25
PFDN6O15212 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PFDN6O15212 MIR4515-201ENST00000584082 81 ntBASIC16.62■□□□□ 0.25
PFDN6O15212 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.62■□□□□ 0.25
PFDN6O15212 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN6O15212 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PFDN6O15212 AC116407.3-201ENST00000623905 1129 ntBASIC16.62■□□□□ 0.25
PFDN6O15212 AL645728.2-201ENST00000641974 660 ntBASIC16.62■□□□□ 0.25
PFDN6O15212 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN6O15212 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PFDN6O15212 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN6O15212 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN6O15212 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN6O15212 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN6O15212 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.61■□□□□ 0.25
PFDN6O15212 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PFDN6O15212 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PFDN6O15212 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms