Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDH17O14917 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDH17O14917 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH17O14917 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH17O14917 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH17O14917 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PCDH17O14917 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH17O14917 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
PCDH17O14917 FAM86C2P-203ENST00000528684 1004 ntBASIC15.85■□□□□ 0.13
PCDH17O14917 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH17O14917 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.85■□□□□ 0.13
PCDH17O14917 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH17O14917 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.85■□□□□ 0.13
PCDH17O14917 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.85■□□□□ 0.13
PCDH17O14917 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH17O14917 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDH17O14917 AP001350.2-201ENST00000625104 1094 ntBASIC15.85■□□□□ 0.13
PCDH17O14917 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH17O14917 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDH17O14917 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
PCDH17O14917 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PCDH17O14917 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 AL596257.1-201ENST00000641463 2694 ntBASIC15.85■□□□□ 0.13
PCDH17O14917 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDH17O14917 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH17O14917 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDH17O14917 AC140658.5-201ENST00000438532 169 ntBASIC15.84■□□□□ 0.13
PCDH17O14917 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDH17O14917 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDH17O14917 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PCDH17O14917 MIR3909-201ENST00000579518 119 ntBASIC15.84■□□□□ 0.13
PCDH17O14917 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 MIR4469-201ENST00000583919 79 ntBASIC15.84■□□□□ 0.13
PCDH17O14917 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PCDH17O14917 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDH17O14917 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH17O14917 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDH17O14917 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH17O14917 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDH17O14917 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDH17O14917 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDH17O14917 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDH17O14917 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH17O14917 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PCDH17O14917 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH17O14917 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH17O14917 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH17O14917 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.83■□□□□ 0.13
PCDH17O14917 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDH17O14917 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms