Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.13■□□□□ 0.97
CHL1O00533 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.13■□□□□ 0.97
CHL1O00533 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.13■□□□□ 0.97
CHL1O00533 AC069120.2-201ENST00000524091 540 ntBASIC21.13■□□□□ 0.97
CHL1O00533 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.13■□□□□ 0.97
CHL1O00533 RN7SL828P-201ENST00000607615 303 ntBASIC21.13■□□□□ 0.97
CHL1O00533 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHL1O00533 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHL1O00533 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHL1O00533 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHL1O00533 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHL1O00533 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CHL1O00533 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHL1O00533 AL035456.1-201ENST00000456064 1369 ntBASIC21.12■□□□□ 0.97
CHL1O00533 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHL1O00533 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHL1O00533 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.12■□□□□ 0.97
CHL1O00533 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.12■□□□□ 0.97
CHL1O00533 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHL1O00533 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.12■□□□□ 0.97
CHL1O00533 AL353705.2-201ENST00000428243 662 ntBASIC21.12■□□□□ 0.97
CHL1O00533 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.12■□□□□ 0.97
CHL1O00533 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.12■□□□□ 0.97
CHL1O00533 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.12■□□□□ 0.97
CHL1O00533 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.12■□□□□ 0.97
CHL1O00533 MIR4321-201ENST00000592276 80 ntBASIC21.12■□□□□ 0.97
CHL1O00533 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.12■□□□□ 0.97
CHL1O00533 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHL1O00533 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.12■□□□□ 0.97
CHL1O00533 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
CHL1O00533 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHL1O00533 REXO1L8P-201ENST00000604378 1897 ntBASIC21.11■□□□□ 0.97
CHL1O00533 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CHL1O00533 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.11■□□□□ 0.97
CHL1O00533 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.11■□□□□ 0.97
CHL1O00533 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.11■□□□□ 0.97
CHL1O00533 SPCS2P1-201ENST00000561636 679 ntBASIC21.11■□□□□ 0.97
CHL1O00533 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC21.11■□□□□ 0.97
CHL1O00533 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.11■□□□□ 0.97
CHL1O00533 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHL1O00533 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHL1O00533 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.1■□□□□ 0.97
CHL1O00533 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CHL1O00533 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.1■□□□□ 0.97
CHL1O00533 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.1■□□□□ 0.97
CHL1O00533 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.1■□□□□ 0.97
CHL1O00533 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.1■□□□□ 0.97
CHL1O00533 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.1■□□□□ 0.97
CHL1O00533 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.1■□□□□ 0.97
CHL1O00533 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.1■□□□□ 0.97
CHL1O00533 AL138828.2-201ENST00000615812 383 ntBASIC21.1■□□□□ 0.97
CHL1O00533 SPDYE12P-201ENST00000618416 771 ntBASIC21.1■□□□□ 0.97
CHL1O00533 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.1■□□□□ 0.97
CHL1O00533 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CHL1O00533 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHL1O00533 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHL1O00533 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.09■□□□□ 0.97
CHL1O00533 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHL1O00533 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.09■□□□□ 0.97
CHL1O00533 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.09■□□□□ 0.97
CHL1O00533 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.09■□□□□ 0.97
CHL1O00533 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHL1O00533 BCRP1-201ENST00000444246 691 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms