Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 MIR574-201ENST00000385209 96 ntBASIC16.58■□□□□ 0.24
CFAP99D6REC4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 AC078925.2-201ENST00000624013 1973 ntBASIC16.58■□□□□ 0.24
CFAP99D6REC4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.58■□□□□ 0.24
CFAP99D6REC4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CFAP99D6REC4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 AL603756.1-201ENST00000606511 2163 ntBASIC16.57■□□□□ 0.24
CFAP99D6REC4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 AC025580.3-201ENST00000617932 1424 ntBASIC16.57■□□□□ 0.24
CFAP99D6REC4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 KRT18P2-201ENST00000447938 1258 ntBASIC16.57■□□□□ 0.24
CFAP99D6REC4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 KRT19P2-202ENST00000557173 1012 ntBASIC16.57■□□□□ 0.24
CFAP99D6REC4 AC040169.1-201ENST00000565382 521 ntBASIC16.57■□□□□ 0.24
CFAP99D6REC4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.57■□□□□ 0.24
CFAP99D6REC4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CFAP99D6REC4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 AC006538.1-201ENST00000567905 1585 ntBASIC16.56■□□□□ 0.24
CFAP99D6REC4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CFAP99D6REC4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CFAP99D6REC4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms