Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 INTS4P1-201ENST00000438455 1935 ntBASIC14.21□□□□□ -0.13
TMEM235A6NFC5 AP005117.1-202ENST00000581724 1908 ntBASIC14.21□□□□□ -0.13
TMEM235A6NFC5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 AL512652.2-201ENST00000625156 1716 ntBASIC14.21□□□□□ -0.13
TMEM235A6NFC5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 AL031731.1-201ENST00000642131 2094 ntBASIC14.21□□□□□ -0.13
TMEM235A6NFC5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 AC096582.2-201ENST00000510860 516 ntBASIC14.21□□□□□ -0.13
TMEM235A6NFC5 AC093827.2-201ENST00000512654 315 ntBASIC14.21□□□□□ -0.13
TMEM235A6NFC5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.21□□□□□ -0.13
TMEM235A6NFC5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TMEM235A6NFC5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM235A6NFC5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM235A6NFC5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM235A6NFC5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.21□□□□□ -0.14
TMEM235A6NFC5 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM235A6NFC5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM235A6NFC5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM235A6NFC5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 AC063952.2-201ENST00000498792 1227 ntBASIC14.2□□□□□ -0.14
TMEM235A6NFC5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 TERC-201ENST00000602385 541 ntBASIC14.2□□□□□ -0.14
TMEM235A6NFC5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 REXO1L8P-201ENST00000604378 1897 ntBASIC14.2□□□□□ -0.14
TMEM235A6NFC5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.2□□□□□ -0.14
TMEM235A6NFC5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms