Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 AP000347.1-202ENST00000435868 847 ntBASIC16.85■□□□□ 0.29
CCDC78A2IDD5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 AC093909.1-201ENST00000504731 1122 ntBASIC16.85■□□□□ 0.29
CCDC78A2IDD5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.85■□□□□ 0.29
CCDC78A2IDD5 AC132872.4-202ENST00000622924 2756 ntBASIC16.84■□□□□ 0.29
CCDC78A2IDD5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 CYP2A7P1-201ENST00000595391 815 ntBASIC16.84■□□□□ 0.29
CCDC78A2IDD5 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCDC78A2IDD5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC78A2IDD5 HYMAI-201ENST00000635591 3347 ntBASIC16.83■□□□□ 0.29
CCDC78A2IDD5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CCDC78A2IDD5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC78A2IDD5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 HLA-A-201ENST00000376802 1334 ntBASIC16.83■□□□□ 0.28
CCDC78A2IDD5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 RNA5SP415-201ENST00000517246 115 ntBASIC16.83■□□□□ 0.28
CCDC78A2IDD5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 UNC93B6-202ENST00000528242 690 ntBASIC16.83■□□□□ 0.28
CCDC78A2IDD5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC78A2IDD5 AC046158.3-201ENST00000624947 2558 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms