Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF103-CHMP3A0A140T963 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 LINC00982-205ENST00000420957 435 ntBASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF103-CHMP3A0A140T963 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 ALOX12P2-203ENST00000570921 1945 ntBASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AP002490.2-201ENST00000524791 560 ntBASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AP001269.4-201ENST00000609611 512 ntBASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AC010331.1-201ENST00000611423 582 ntBASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RNF103-CHMP3A0A140T963 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms