Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FO393414.2-201ENST00000405153 598 ntBASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC104596.2-201ENST00000512793 793 ntBASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LOC102724428A0A0B4J2F2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 AP002490.2-201ENST00000524791 560 ntBASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.8■□□□□ 0.92
LOC102724428A0A0B4J2F2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 CYP4F24P-201ENST00000586049 1580 ntBASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.79■□□□□ 0.92
LOC102724428A0A0B4J2F2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC018665.1-201ENST00000622927 1362 ntBASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 FAM8A2P-201ENST00000528813 1142 ntBASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 AL391069.4-201ENST00000609583 481 ntBASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.78■□□□□ 0.92
LOC102724428A0A0B4J2F2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms