Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP3Q9Y2W7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP3Q9Y2W7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 AL138831.2-201ENST00000606564 490 ntBASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 AL603832.2-201ENST00000566195 2125 ntBASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 DBET-201ENST00000630918 3363 ntBASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
KCNIP3Q9Y2W7 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms