Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AC079328.2-201ENST00000561241 3354 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 NKILA-202ENST00000614771 2598 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 MCCD1P2-201ENST00000423228 335 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AL031432.2-201ENST00000566714 459 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AL928711.1-201ENST00000570165 459 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AC091167.2-201ENST00000579581 588 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AC092364.2-202ENST00000597012 1073 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AL645728.2-201ENST00000641974 660 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 HMGA1P7-201ENST00000406908 502 ntBASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AP006288.1-201ENST00000446065 395 ntBASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 ALG1L5P-201ENST00000482043 771 ntBASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AC087641.1-201ENST00000557561 1021 ntBASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AC239800.4-201ENST00000603712 296 ntBASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AC068137.2-201ENST00000605408 478 ntBASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AP001350.2-201ENST00000625104 1094 ntBASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 AC011676.5-201ENST00000624864 2660 ntBASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPH3AQ9Y2J0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms