Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 AC236430.1-201ENST00000402231 743 ntBASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDZRN3Q9UPQ7 AL645728.1-201ENST00000366221 2101 ntBASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.35■■□□□ 1.01
PDZRN3Q9UPQ7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 SPDYE7P-202ENST00000420373 878 ntBASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 FAM58DP-201ENST00000428076 619 ntBASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 GPS2P2-201ENST00000430745 888 ntBASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 GAPDHP21-201ENST00000450301 1010 ntBASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 AL135744.1-201ENST00000565098 629 ntBASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 MIR4515-201ENST00000584082 81 ntBASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 AC084121.4-201ENST00000641598 221 ntBASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 AF228730.8-201ENST00000642140 221 ntBASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
PDZRN3Q9UPQ7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 GK-202ENST00000378941 458 ntTSL 3 BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.33■■□□□ 1.01
PDZRN3Q9UPQ7 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms